Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs7201109 chr16:30838007 T/C 8.85E-9 172 4.5 18.03 22.8 KM Plot
UCEC rs7216303 chr17:65060773 A/G 8.23E-6 173 22.67 22.57 16.2 KM Plot
UCEC rs722686 chr14:75382710 G/A 0 171 22.8 19.57 1.03 KM Plot
UCEC rs722687 chr14:75382766 C/T 0 171 22.8 19.57 1.03 KM Plot
UCEC rs7256434 chr19:316040 A/G 5.65E-6 174 24.07 19.1 14.57 KM Plot
UCEC rs72680191 chr14:33985223 C/T 0 172 22.03 27.33 1.67 KM Plot
UCEC rs72703938 chr4:183627375 G/A 1.58E-9 170 22.6 22.82 13.1 KM Plot
UCEC rs72703944 chr4:183637273 A/G 1.3E-9 171 22.63 22.82 13.1 KM Plot
UCEC rs72704473 chr5:1811539 C/T 4.22E-5 166 22.6 19.17 14.23 KM Plot
UCEC rs72750438 chr9:95019350 A/G 0 174 22.57 22.7 1.67 KM Plot
UCEC rs72917405 chr2:74091097 T/C 1.21E-5 171 22.7 21.1 18.47 KM Plot
UCEC rs72921498 chr11:62113090 C/T 0.000102 172 22.75 21.07 4.5 KM Plot
UCEC rs72921501 chr11:62115622 A/T 1.02E-11 173 22.6 20.72 4.33 KM Plot
UCEC rs72923207 chr11:62117959 A/G 1.3E-11 172 22.57 26.9 4.33 KM Plot
UCEC rs72923263 chr11:62161170 C/G 1.06E-11 173 22.57 26.27 4.33 KM Plot